Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-2P42586 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-2P42586 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-2P42586 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.33□□□□□ -0.12
Nkx2-2P42586 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Gm17971-201ENSMUST00000190239 806 ntBASIC14.33□□□□□ -0.12
Nkx2-2P42586 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Nkx2-2P42586 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.33□□□□□ -0.12
Nkx2-2P42586 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.33□□□□□ -0.12
Nkx2-2P42586 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-2P42586 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm24589-201ENSMUST00000116692 94 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm15358-201ENSMUST00000119249 520 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm11780-201ENSMUST00000136880 516 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm4535-201ENSMUST00000182274 558 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44357-201ENSMUST00000195897 142 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm19658-201ENSMUST00000196231 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44367-201ENSMUST00000196836 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44350-201ENSMUST00000197197 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44390-201ENSMUST00000197533 144 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44313-201ENSMUST00000198018 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44486-201ENSMUST00000198508 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44314-201ENSMUST00000199263 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44394-201ENSMUST00000199558 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44484-201ENSMUST00000199873 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44466-201ENSMUST00000200264 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44359-201ENSMUST00000200671 138 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Gm10355-201ENSMUST00000097146 517 ntBASIC14.32□□□□□ -0.12
Nkx2-2P42586 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-2P42586 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.31□□□□□ -0.12
Nkx2-2P42586 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.31□□□□□ -0.12
Nkx2-2P42586 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.31□□□□□ -0.12
Nkx2-2P42586 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nkx2-2P42586 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms