Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox6P40645 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.71□□□□□ -0.05
Sox6P40645 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Sox6P40645 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sox6P40645 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox6P40645 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sox6P40645 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox6P40645 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox6P40645 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox6P40645 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox6P40645 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox6P40645 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.7□□□□□ -0.06
Sox6P40645 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.7□□□□□ -0.06
Sox6P40645 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.7□□□□□ -0.06
Sox6P40645 Gm6345-202ENSMUST00000180900 204 ntBASIC14.7□□□□□ -0.06
Sox6P40645 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sox6P40645 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox6P40645 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Sox6P40645 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox6P40645 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox6P40645 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox6P40645 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Gm11950-201ENSMUST00000121615 838 ntBASIC14.69□□□□□ -0.06
Sox6P40645 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox6P40645 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox6P40645 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sox6P40645 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox6P40645 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox6P40645 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Sox6P40645 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox6P40645 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox6P40645 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox6P40645 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms