Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Gm18737-201ENSMUST00000173594 937 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Gm9824-201ENSMUST00000178707 561 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Gm38294-201ENSMUST00000192831 381 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Gm7653-201ENSMUST00000214567 508 ntBASIC16.06■□□□□ 0.16
Cxcl12P40224 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.06■□□□□ 0.16
Cxcl12P40224 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cxcl12P40224 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.05■□□□□ 0.16
Cxcl12P40224 Gm11543-201ENSMUST00000120758 370 ntBASIC16.05■□□□□ 0.16
Cxcl12P40224 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.05■□□□□ 0.16
Cxcl12P40224 Gm6888-201ENSMUST00000221983 706 ntBASIC16.05■□□□□ 0.16
Cxcl12P40224 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cxcl12P40224 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Cxcl12P40224 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cxcl12P40224 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cxcl12P40224 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.04■□□□□ 0.16
Cxcl12P40224 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Gm7488-201ENSMUST00000117148 684 ntBASIC16.04■□□□□ 0.16
Cxcl12P40224 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cxcl12P40224 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cxcl12P40224 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm18187-201ENSMUST00000196476 984 ntBASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.03■□□□□ 0.16
Cxcl12P40224 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Cxcl12P40224 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.02■□□□□ 0.16
Cxcl12P40224 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cxcl12P40224 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.02■□□□□ 0.16
Cxcl12P40224 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Cxcl12P40224 Gm38225-201ENSMUST00000194001 393 ntBASIC16.02■□□□□ 0.16
Cxcl12P40224 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cxcl12P40224 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cxcl12P40224 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms