Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Usp53P15975 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp53P15975 Gm15467-201ENSMUST00000120582 445 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Gm9727-201ENSMUST00000161387 555 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp53P15975 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp53P15975 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp53P15975 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.07■□□□□ 0.48
Usp53P15975 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Gm9682-201ENSMUST00000197505 556 ntBASIC18.07■□□□□ 0.48
Usp53P15975 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.07■□□□□ 0.48
Usp53P15975 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.07■□□□□ 0.48
Usp53P15975 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Usp53P15975 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Usp53P15975 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Usp53P15975 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp53P15975 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Gm4995-201ENSMUST00000117247 432 ntBASIC18.06■□□□□ 0.48
Usp53P15975 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.06■□□□□ 0.48
Usp53P15975 Gm27300-201ENSMUST00000184085 97 ntBASIC18.06■□□□□ 0.48
Usp53P15975 Gm27335-201ENSMUST00000184758 97 ntBASIC18.06■□□□□ 0.48
Usp53P15975 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.06■□□□□ 0.48
Usp53P15975 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.06■□□□□ 0.48
Usp53P15975 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Usp53P15975 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Gm14494-201ENSMUST00000118786 435 ntBASIC18.05■□□□□ 0.48
Usp53P15975 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.05■□□□□ 0.48
Usp53P15975 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.05■□□□□ 0.48
Usp53P15975 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.05■□□□□ 0.48
Usp53P15975 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.05■□□□□ 0.48
Usp53P15975 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Usp53P15975 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Usp53P15975 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Usp53P15975 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.04■□□□□ 0.48
Usp53P15975 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.04■□□□□ 0.48
Usp53P15975 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.04■□□□□ 0.48
Usp53P15975 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.04■□□□□ 0.48
Usp53P15975 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Usp53P15975 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Usp53P15975 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.04■□□□□ 0.48
Usp53P15975 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Usp53P15975 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.04■□□□□ 0.48
Usp53P15975 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp53P15975 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp53P15975 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp53P15975 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Usp53P15975 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms