Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccl3P10855 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ccl3P10855 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ccl3P10855 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccl3P10855 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ccl3P10855 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ccl3P10855 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccl3P10855 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.76□□□□□ -0.21
Ccl3P10855 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccl3P10855 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Ccl3P10855 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm8318-201ENSMUST00000182954 872 ntBASIC13.76□□□□□ -0.21
Ccl3P10855 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm20949-201ENSMUST00000206478 952 ntBASIC13.76□□□□□ -0.21
Ccl3P10855 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ccl3P10855 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ccl3P10855 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.76□□□□□ -0.21
Ccl3P10855 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ccl3P10855 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.76□□□□□ -0.21
Ccl3P10855 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ccl3P10855 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ccl3P10855 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.75□□□□□ -0.21
Ccl3P10855 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.75□□□□□ -0.21
Ccl3P10855 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Ccl3P10855 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccl3P10855 Gm16198-201ENSMUST00000118766 670 ntBASIC13.75□□□□□ -0.21
Ccl3P10855 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.75□□□□□ -0.21
Ccl3P10855 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Gm27321-201ENSMUST00000185021 205 ntBASIC13.75□□□□□ -0.21
Ccl3P10855 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ccl3P10855 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Ccl3P10855 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ccl3P10855 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.74□□□□□ -0.21
Ccl3P10855 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccl3P10855 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ccl3P10855 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccl3P10855 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms