Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Col4a2P08122 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col4a2P08122 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a2P08122 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a2P08122 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.41□□□□□ -0.1
Col4a2P08122 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.41□□□□□ -0.1
Col4a2P08122 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col4a2P08122 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a2P08122 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.41□□□□□ -0.1
Col4a2P08122 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.41□□□□□ -0.1
Col4a2P08122 Gm15693-201ENSMUST00000120470 637 ntBASIC14.41□□□□□ -0.1
Col4a2P08122 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a2P08122 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a2P08122 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Col4a2P08122 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.4□□□□□ -0.1
Col4a2P08122 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col4a2P08122 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.4□□□□□ -0.1
Col4a2P08122 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Gm8318-201ENSMUST00000182954 872 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.4□□□□□ -0.1
Col4a2P08122 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a2P08122 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col4a2P08122 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.39□□□□□ -0.11
Col4a2P08122 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Col4a2P08122 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.39□□□□□ -0.11
Col4a2P08122 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col4a2P08122 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.39□□□□□ -0.11
Col4a2P08122 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.39□□□□□ -0.11
Col4a2P08122 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.39□□□□□ -0.11
Col4a2P08122 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a2P08122 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a2P08122 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col4a2P08122 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms