Protein–RNA interactions for Protein: P06837

Gap43, Neuromodulin, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gap43P06837 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.13■□□□□ 0.17
Gap43P06837 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gap43P06837 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gap43P06837 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gap43P06837 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Gap43P06837 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gap43P06837 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.12■□□□□ 0.17
Gap43P06837 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.12■□□□□ 0.17
Gap43P06837 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.12■□□□□ 0.17
Gap43P06837 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.12■□□□□ 0.17
Gap43P06837 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Odf3b-204ENSMUST00000227834 930 ntBASIC16.12■□□□□ 0.17
Gap43P06837 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.12■□□□□ 0.17
Gap43P06837 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gap43P06837 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gap43P06837 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gap43P06837 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Gap43P06837 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.11■□□□□ 0.17
Gap43P06837 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gap43P06837 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.11■□□□□ 0.17
Gap43P06837 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Gap43P06837 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gap43P06837 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Gap43P06837 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gap43P06837 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Gap43P06837 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.1■□□□□ 0.17
Gap43P06837 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.1■□□□□ 0.17
Gap43P06837 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.1■□□□□ 0.17
Gap43P06837 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.1■□□□□ 0.17
Gap43P06837 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gap43P06837 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gap43P06837 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.1■□□□□ 0.17
Gap43P06837 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Gap43P06837 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.1■□□□□ 0.17
Gap43P06837 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gap43P06837 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Gap43P06837 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Gap43P06837 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Gap43P06837 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Gap43P06837 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.09■□□□□ 0.17
Gap43P06837 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gap43P06837 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms