Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PrnpP04925 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PrnpP04925 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PrnpP04925 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PrnpP04925 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PrnpP04925 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
PrnpP04925 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.14■□□□□ 0.17
PrnpP04925 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Rpph1-201ENSMUST00000175096 319 ntBASIC16.14■□□□□ 0.17
PrnpP04925 Gm20553-201ENSMUST00000204205 844 ntBASIC16.14■□□□□ 0.17
PrnpP04925 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PrnpP04925 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PrnpP04925 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PrnpP04925 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.13■□□□□ 0.17
PrnpP04925 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.13■□□□□ 0.17
PrnpP04925 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.13■□□□□ 0.17
PrnpP04925 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.13■□□□□ 0.17
PrnpP04925 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PrnpP04925 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Gm43474-201ENSMUST00000196415 774 ntBASIC16.13■□□□□ 0.17
PrnpP04925 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.13■□□□□ 0.17
PrnpP04925 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.13■□□□□ 0.17
PrnpP04925 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.13■□□□□ 0.17
PrnpP04925 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.13■□□□□ 0.17
PrnpP04925 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PrnpP04925 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PrnpP04925 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.13■□□□□ 0.17
PrnpP04925 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.13■□□□□ 0.17
PrnpP04925 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PrnpP04925 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.12■□□□□ 0.17
PrnpP04925 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.12■□□□□ 0.17
PrnpP04925 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Gm2272-201ENSMUST00000194903 582 ntBASIC16.12■□□□□ 0.17
PrnpP04925 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PrnpP04925 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.12■□□□□ 0.17
PrnpP04925 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PrnpP04925 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PrnpP04925 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.12■□□□□ 0.17
PrnpP04925 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PrnpP04925 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.12■□□□□ 0.17
PrnpP04925 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PrnpP04925 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
PrnpP04925 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PrnpP04925 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms