Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxa3P02831 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Gm7230-201ENSMUST00000173026 815 ntBASIC13.1□□□□□ -0.31
Hoxa3P02831 Mir5126-201ENSMUST00000175513 77 ntBASIC13.1□□□□□ -0.31
Hoxa3P02831 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Gm18206-201ENSMUST00000207027 926 ntBASIC13.1□□□□□ -0.31
Hoxa3P02831 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxa3P02831 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Hoxa3P02831 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
Hoxa3P02831 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hoxa3P02831 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxa3P02831 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.1□□□□□ -0.31
Hoxa3P02831 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxa3P02831 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxa3P02831 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.09□□□□□ -0.31
Hoxa3P02831 Gm1401-201ENSMUST00000122048 772 ntBASIC13.09□□□□□ -0.31
Hoxa3P02831 Gm15173-201ENSMUST00000122049 433 ntBASIC13.09□□□□□ -0.31
Hoxa3P02831 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hoxa3P02831 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.09□□□□□ -0.31
Hoxa3P02831 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Gm8655-201ENSMUST00000221159 852 ntBASIC13.09□□□□□ -0.31
Hoxa3P02831 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxa3P02831 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxa3P02831 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxa3P02831 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxa3P02831 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.08□□□□□ -0.32
Hoxa3P02831 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm6089-201ENSMUST00000197666 938 ntBASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.08□□□□□ -0.32
Hoxa3P02831 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.08□□□□□ -0.32
Hoxa3P02831 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxa3P02831 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms