Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Hdac3O88895 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.02□□□□□ -0.17
Hdac3O88895 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Hdac3O88895 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdac3O88895 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.01□□□□□ -0.17
Hdac3O88895 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Hdac3O88895 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdac3O88895 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hdac3O88895 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdac3O88895 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdac3O88895 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdac3O88895 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hdac3O88895 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdac3O88895 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14□□□□□ -0.17
Hdac3O88895 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14□□□□□ -0.17
Hdac3O88895 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14□□□□□ -0.17
Hdac3O88895 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14□□□□□ -0.17
Hdac3O88895 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 AC114585.2-202ENSMUST00000228094 426 ntBASIC14□□□□□ -0.17
Hdac3O88895 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Hdac3O88895 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hdac3O88895 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hdac3O88895 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Hdac3O88895 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Hdac3O88895 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Hdac3O88895 Gm7977-201ENSMUST00000193787 748 ntBASIC13.99□□□□□ -0.17
Hdac3O88895 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Hdac3O88895 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hdac3O88895 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms