Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Best1O88870 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15□□□□□ -0.01
Best1O88870 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Best1O88870 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Best1O88870 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Best1O88870 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15□□□□□ -0.01
Best1O88870 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Best1O88870 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.99□□□□□ -0.01
Best1O88870 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Best1O88870 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Best1O88870 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.99□□□□□ -0.01
Best1O88870 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Best1O88870 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Best1O88870 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.99□□□□□ -0.01
Best1O88870 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Mir3113-201ENSMUST00000175478 76 ntBASIC14.99□□□□□ -0.01
Best1O88870 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.99□□□□□ -0.01
Best1O88870 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.99□□□□□ -0.01
Best1O88870 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Best1O88870 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Best1O88870 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Best1O88870 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.98□□□□□ -0.01
Best1O88870 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.98□□□□□ -0.01
Best1O88870 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.98□□□□□ -0.01
Best1O88870 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.98□□□□□ -0.01
Best1O88870 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.98□□□□□ -0.01
Best1O88870 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Best1O88870 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.98□□□□□ -0.01
Best1O88870 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.98□□□□□ -0.01
Best1O88870 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Best1O88870 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.97□□□□□ -0.01
Best1O88870 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.97□□□□□ -0.01
Best1O88870 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.97□□□□□ -0.01
Best1O88870 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Best1O88870 Gm2213-201ENSMUST00000197485 688 ntBASIC14.97□□□□□ -0.01
Best1O88870 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms