Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.03■□□□□ 0.64
Cops6O88545 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.03■□□□□ 0.64
Cops6O88545 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Gm27494-201ENSMUST00000184735 189 ntBASIC19.03■□□□□ 0.64
Cops6O88545 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.03■□□□□ 0.64
Cops6O88545 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.03■□□□□ 0.64
Cops6O88545 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cops6O88545 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops6O88545 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.02■□□□□ 0.64
Cops6O88545 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cops6O88545 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops6O88545 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Cops6O88545 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.02■□□□□ 0.64
Cops6O88545 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cops6O88545 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cops6O88545 Gm14701-201ENSMUST00000117156 348 ntBASIC19.02■□□□□ 0.64
Cops6O88545 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Cops6O88545 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.02■□□□□ 0.64
Cops6O88545 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.02■□□□□ 0.64
Cops6O88545 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.02■□□□□ 0.63
Cops6O88545 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cops6O88545 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cops6O88545 Gm6226-201ENSMUST00000117765 1146 ntBASIC19.01■□□□□ 0.63
Cops6O88545 Mir1895-201ENSMUST00000122615 79 ntBASIC19.01■□□□□ 0.63
Cops6O88545 Gm11025-201ENSMUST00000140773 466 ntBASIC19.01■□□□□ 0.63
Cops6O88545 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Thap2-203ENSMUST00000218989 527 ntBASIC19.01■□□□□ 0.63
Cops6O88545 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cops6O88545 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cops6O88545 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Cops6O88545 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cops6O88545 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cops6O88545 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19■□□□□ 0.63
Cops6O88545 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19■□□□□ 0.63
Cops6O88545 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cops6O88545 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19■□□□□ 0.63
Cops6O88545 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19■□□□□ 0.63
Cops6O88545 Gm45612-201ENSMUST00000211320 160 ntBASIC19■□□□□ 0.63
Cops6O88545 Gm8396-201ENSMUST00000057361 823 ntBASIC19■□□□□ 0.63
Cops6O88545 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19■□□□□ 0.63
Cops6O88545 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19■□□□□ 0.63
Cops6O88545 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19■□□□□ 0.63
Cops6O88545 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cops6O88545 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.99■□□□□ 0.63
Cops6O88545 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.99■□□□□ 0.63
Cops6O88545 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.99■□□□□ 0.63
Cops6O88545 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cops6O88545 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.99■□□□□ 0.63
Cops6O88545 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cops6O88545 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Cops6O88545 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cops6O88545 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cops6O88545 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms