Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cops4O88544 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cops4O88544 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Cops4O88544 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cops4O88544 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Cops4O88544 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Gm13474-201ENSMUST00000122466 815 ntBASIC14.47□□□□□ -0.09
Cops4O88544 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cops4O88544 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cops4O88544 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cops4O88544 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops4O88544 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cops4O88544 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.46□□□□□ -0.09
Cops4O88544 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Cops4O88544 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Gm11539-201ENSMUST00000119837 557 ntBASIC14.46□□□□□ -0.09
Cops4O88544 Gm16061-201ENSMUST00000122167 857 ntBASIC14.46□□□□□ -0.09
Cops4O88544 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.46□□□□□ -0.09
Cops4O88544 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cops4O88544 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops4O88544 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops4O88544 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cops4O88544 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops4O88544 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cops4O88544 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Cops4O88544 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cops4O88544 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cops4O88544 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
Cops4O88544 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops4O88544 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops4O88544 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.45□□□□□ -0.1
Cops4O88544 Gm44450-201ENSMUST00000199528 114 ntBASIC14.45□□□□□ -0.1
Cops4O88544 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops4O88544 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Gm7370-201ENSMUST00000219471 767 ntBASIC14.45□□□□□ -0.1
Cops4O88544 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops4O88544 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms