Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.82□□□□□ -0.04
Tgfbr3O88393 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tgfbr3O88393 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.81□□□□□ -0.04
Tgfbr3O88393 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Haglr-201ENSMUST00000100000 2085 ntBASIC14.81□□□□□ -0.04
Tgfbr3O88393 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tgfbr3O88393 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Gm20553-201ENSMUST00000204205 844 ntBASIC14.8□□□□□ -0.04
Tgfbr3O88393 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.8□□□□□ -0.04
Tgfbr3O88393 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tgfbr3O88393 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.79□□□□□ -0.04
Tgfbr3O88393 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tgfbr3O88393 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.78□□□□□ -0.04
Tgfbr3O88393 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.78□□□□□ -0.04
Tgfbr3O88393 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tgfbr3O88393 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms