Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc4a4O88343 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc4a4O88343 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.42■□□□□ 0.54
Slc4a4O88343 Gm45167-201ENSMUST00000208007 322 ntBASIC18.42■□□□□ 0.54
Slc4a4O88343 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc4a4O88343 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc4a4O88343 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc4a4O88343 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Slc4a4O88343 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc4a4O88343 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.41■□□□□ 0.54
Slc4a4O88343 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.41■□□□□ 0.54
Slc4a4O88343 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc4a4O88343 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.4■□□□□ 0.54
Slc4a4O88343 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.4■□□□□ 0.54
Slc4a4O88343 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc4a4O88343 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc4a4O88343 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Slc4a4O88343 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.39■□□□□ 0.53
Slc4a4O88343 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Slc4a4O88343 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc4a4O88343 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.39■□□□□ 0.53
Slc4a4O88343 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.39■□□□□ 0.53
Slc4a4O88343 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc4a4O88343 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.39■□□□□ 0.53
Slc4a4O88343 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.39■□□□□ 0.53
Slc4a4O88343 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.39■□□□□ 0.53
Slc4a4O88343 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.39■□□□□ 0.53
Slc4a4O88343 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc4a4O88343 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.38■□□□□ 0.53
Slc4a4O88343 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Gm14140-201ENSMUST00000119999 995 ntBASIC18.38■□□□□ 0.53
Slc4a4O88343 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc4a4O88343 Gm4899-201ENSMUST00000178708 719 ntBASIC18.38■□□□□ 0.53
Slc4a4O88343 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.38■□□□□ 0.53
Slc4a4O88343 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.38■□□□□ 0.53
Slc4a4O88343 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slc4a4O88343 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Slc4a4O88343 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms