Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdlim3O70209 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim3O70209 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Gm6257-201ENSMUST00000163864 910 ntBASIC14.19□□□□□ -0.14
Pdlim3O70209 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.19□□□□□ -0.14
Pdlim3O70209 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.19□□□□□ -0.14
Pdlim3O70209 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim3O70209 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim3O70209 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Pdlim3O70209 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Gm13559-201ENSMUST00000120476 863 ntBASIC14.18□□□□□ -0.14
Pdlim3O70209 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.18□□□□□ -0.14
Pdlim3O70209 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Mir6404-201ENSMUST00000183699 94 ntBASIC14.18□□□□□ -0.14
Pdlim3O70209 Gm37722-201ENSMUST00000193757 208 ntBASIC14.18□□□□□ -0.14
Pdlim3O70209 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdlim3O70209 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pdlim3O70209 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pdlim3O70209 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pdlim3O70209 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.17□□□□□ -0.14
Pdlim3O70209 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm27011-201ENSMUST00000182352 972 ntBASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm37055-201ENSMUST00000191866 133 ntBASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.17□□□□□ -0.14
Pdlim3O70209 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Gm45058-201ENSMUST00000205810 766 ntBASIC14.17□□□□□ -0.14
Pdlim3O70209 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Pdlim3O70209 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.17□□□□□ -0.14
Pdlim3O70209 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Pdlim3O70209 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pdlim3O70209 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pdlim3O70209 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms