Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.81□□□□□ -0.04
Rdh5O55240 Gm15372-201ENSMUST00000120729 834 ntBASIC14.81□□□□□ -0.04
Rdh5O55240 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.81□□□□□ -0.04
Rdh5O55240 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.81□□□□□ -0.04
Rdh5O55240 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Birc2-201ENSMUST00000054878 378 ntBASIC14.81□□□□□ -0.04
Rdh5O55240 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rdh5O55240 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Rdh5O55240 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rdh5O55240 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Rdh5O55240 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rdh5O55240 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.8□□□□□ -0.04
Rdh5O55240 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.8□□□□□ -0.04
Rdh5O55240 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.8□□□□□ -0.04
Rdh5O55240 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.8□□□□□ -0.04
Rdh5O55240 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rdh5O55240 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.79□□□□□ -0.04
Rdh5O55240 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.79□□□□□ -0.04
Rdh5O55240 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.79□□□□□ -0.04
Rdh5O55240 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.79□□□□□ -0.04
Rdh5O55240 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rdh5O55240 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.79□□□□□ -0.04
Rdh5O55240 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rdh5O55240 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rdh5O55240 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rdh5O55240 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rdh5O55240 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.79□□□□□ -0.04
Rdh5O55240 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rdh5O55240 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rdh5O55240 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rdh5O55240 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rdh5O55240 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.78□□□□□ -0.04
Rdh5O55240 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.78□□□□□ -0.04
Rdh5O55240 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.78□□□□□ -0.04
Rdh5O55240 Gm34391-201ENSMUST00000203706 907 ntBASIC14.78□□□□□ -0.04
Rdh5O55240 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.78□□□□□ -0.04
Rdh5O55240 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.78□□□□□ -0.04
Rdh5O55240 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.78□□□□□ -0.04
Rdh5O55240 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.78□□□□□ -0.04
Rdh5O55240 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.78□□□□□ -0.04
Rdh5O55240 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rdh5O55240 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rdh5O55240 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rdh5O55240 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rdh5O55240 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms