Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.97□□□□□ -0.33
SncaO55042 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SncaO55042 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SncaO55042 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SncaO55042 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.97□□□□□ -0.33
SncaO55042 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
SncaO55042 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SncaO55042 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SncaO55042 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.97□□□□□ -0.33
SncaO55042 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.97□□□□□ -0.33
SncaO55042 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Gm22697-201ENSMUST00000175194 63 ntBASIC12.97□□□□□ -0.33
SncaO55042 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.97□□□□□ -0.33
SncaO55042 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SncaO55042 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.97□□□□□ -0.33
SncaO55042 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SncaO55042 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
SncaO55042 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SncaO55042 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.96□□□□□ -0.33
SncaO55042 Gm44430-201ENSMUST00000203376 995 ntBASIC12.96□□□□□ -0.33
SncaO55042 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SncaO55042 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SncaO55042 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SncaO55042 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.96□□□□□ -0.34
SncaO55042 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SncaO55042 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.96□□□□□ -0.34
SncaO55042 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SncaO55042 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SncaO55042 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
SncaO55042 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
SncaO55042 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SncaO55042 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.95□□□□□ -0.34
SncaO55042 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SncaO55042 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SncaO55042 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.95□□□□□ -0.34
SncaO55042 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.95□□□□□ -0.34
SncaO55042 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SncaO55042 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SncaO55042 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SncaO55042 Asic1-205ENSMUST00000228185 1818 ntBASIC12.95□□□□□ -0.34
SncaO55042 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SncaO55042 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SncaO55042 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms