Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.81■□□□□ 0.28
Nr1i3O35627 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1i3O35627 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1i3O35627 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.8■□□□□ 0.28
Nr1i3O35627 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.8■□□□□ 0.28
Nr1i3O35627 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nr1i3O35627 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nr1i3O35627 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.79■□□□□ 0.28
Nr1i3O35627 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Nr1i3O35627 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nr1i3O35627 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nr1i3O35627 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.78■□□□□ 0.28
Nr1i3O35627 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.78■□□□□ 0.28
Nr1i3O35627 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.78■□□□□ 0.28
Nr1i3O35627 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nr1i3O35627 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nr1i3O35627 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Gm19164-201ENSMUST00000210667 640 ntBASIC16.77■□□□□ 0.28
Nr1i3O35627 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.77■□□□□ 0.28
Nr1i3O35627 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1i3O35627 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1i3O35627 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1i3O35627 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Nr1i3O35627 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nr1i3O35627 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.77■□□□□ 0.27
Nr1i3O35627 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Nr1i3O35627 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nr1i3O35627 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.76■□□□□ 0.27
Nr1i3O35627 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms