Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.91■□□□□ 0.3
Clcn6O35454 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clcn6O35454 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clcn6O35454 Gm3715-201ENSMUST00000172308 617 ntBASIC16.91■□□□□ 0.3
Clcn6O35454 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.91■□□□□ 0.3
Clcn6O35454 Gm44554-201ENSMUST00000208738 147 ntBASIC16.91■□□□□ 0.3
Clcn6O35454 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Clcn6O35454 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Clcn6O35454 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn6O35454 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Clcn6O35454 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Clcn6O35454 Gm11877-201ENSMUST00000118921 852 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.9■□□□□ 0.3
Clcn6O35454 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Gm27000-201ENSMUST00000182943 842 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Gm38283-201ENSMUST00000193041 695 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 AL929555.1-201ENSMUST00000215283 509 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC16.9■□□□□ 0.3
Clcn6O35454 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.9■□□□□ 0.3
Clcn6O35454 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clcn6O35454 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn6O35454 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Clcn6O35454 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Clcn6O35454 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Mir1192-201ENSMUST00000116976 121 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Gm6433-201ENSMUST00000118634 875 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Gm11510-201ENSMUST00000120278 347 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Gm15171-201ENSMUST00000122191 334 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Clcn6O35454 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC16.89■□□□□ 0.29
Clcn6O35454 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC16.89■□□□□ 0.29
Clcn6O35454 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.89■□□□□ 0.29
Clcn6O35454 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clcn6O35454 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clcn6O35454 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.89■□□□□ 0.29
Clcn6O35454 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.89■□□□□ 0.29
Clcn6O35454 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clcn6O35454 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Clcn6O35454 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Clcn6O35454 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC16.88■□□□□ 0.29
Clcn6O35454 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.88■□□□□ 0.29
Clcn6O35454 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clcn6O35454 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms