Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hdac1O09106 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hdac1O09106 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Gm6623-201ENSMUST00000173570 544 ntBASIC18.6■□□□□ 0.57
Hdac1O09106 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.6■□□□□ 0.57
Hdac1O09106 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hdac1O09106 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC18.6■□□□□ 0.57
Hdac1O09106 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Hdac1O09106 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Hdac1O09106 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Hdac1O09106 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.59■□□□□ 0.57
Hdac1O09106 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hdac1O09106 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.59■□□□□ 0.57
Hdac1O09106 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hdac1O09106 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hdac1O09106 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.59■□□□□ 0.57
Hdac1O09106 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac1O09106 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Hdac1O09106 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac1O09106 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.58■□□□□ 0.57
Hdac1O09106 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Hdac1O09106 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Hdac1O09106 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Gm10013-201ENSMUST00000106074 672 ntBASIC18.58■□□□□ 0.56
Hdac1O09106 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Gm6345-202ENSMUST00000180900 204 ntBASIC18.58■□□□□ 0.56
Hdac1O09106 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.58■□□□□ 0.56
Hdac1O09106 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac1O09106 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac1O09106 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac1O09106 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Hdac1O09106 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac1O09106 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Hdac1O09106 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Hdac1O09106 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Hdac1O09106 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.58■□□□□ 0.56
Hdac1O09106 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.58■□□□□ 0.56
Hdac1O09106 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac1O09106 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Hdac1O09106 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.57■□□□□ 0.56
Hdac1O09106 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Hdac1O09106 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Hdac1O09106 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Hdac1O09106 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms