Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3tc1G3X9F6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Gm14722-201ENSMUST00000118943 689 ntBASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Gm10499-201ENSMUST00000174094 934 ntBASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3tc1G3X9F6 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sh3tc1G3X9F6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Mir449b-201ENSMUST00000104833 80 ntBASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Gm27321-201ENSMUST00000185021 205 ntBASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Mir7023-201ENSMUST00000185093 64 ntBASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3tc1G3X9F6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm7774-201ENSMUST00000200064 533 ntBASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm20949-201ENSMUST00000206478 952 ntBASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.81■□□□□ 0.6
Sh3tc1G3X9F6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Gm22175-201ENSMUST00000175007 78 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Gm10154-201ENSMUST00000084445 354 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3tc1G3X9F6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh3tc1G3X9F6 Gm22065-201ENSMUST00000103753 110 ntBASIC18.79■□□□□ 0.6
Sh3tc1G3X9F6 Gm22066-201ENSMUST00000103761 110 ntBASIC18.79■□□□□ 0.6
Sh3tc1G3X9F6 Gm24932-201ENSMUST00000103763 110 ntBASIC18.79■□□□□ 0.6
Sh3tc1G3X9F6 Gm24115-201ENSMUST00000103799 110 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms