Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb9E9Q5G2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Pcdhb9E9Q5G2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb9E9Q5G2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Dancr-204ENSMUST00000132389 2347 ntBASIC18.33■□□□□ 0.53
Pcdhb9E9Q5G2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Gm14140-201ENSMUST00000119999 995 ntBASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Gm8318-201ENSMUST00000182954 872 ntBASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb9E9Q5G2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb9E9Q5G2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb9E9Q5G2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms