Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm12887B1AVM1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm12887B1AVM1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Gm37856-201ENSMUST00000191634 999 ntBASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm12887B1AVM1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gm5643-201ENSMUST00000117081 966 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gm11539-201ENSMUST00000119837 557 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Timm23-208ENSMUST00000226683 750 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm12887B1AVM1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms