Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.31■□□□□ 0.2
Scn1aA2APX8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scn1aA2APX8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Scn1aA2APX8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.3■□□□□ 0.2
Scn1aA2APX8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.3■□□□□ 0.2
Scn1aA2APX8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn1aA2APX8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Gm12008-201ENSMUST00000117791 755 ntBASIC16.29■□□□□ 0.2
Scn1aA2APX8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn1aA2APX8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Gm45747-201ENSMUST00000212203 999 ntBASIC16.28■□□□□ 0.2
Scn1aA2APX8 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.28■□□□□ 0.2
Scn1aA2APX8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Scn1aA2APX8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn1aA2APX8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms