Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc194A0A140LIT1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ccdc194A0A140LIT1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.58■□□□□ 0.09
Ccdc194A0A140LIT1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc194A0A140LIT1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc194A0A140LIT1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ccdc194A0A140LIT1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc194A0A140LIT1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Gm6345-202ENSMUST00000180900 204 ntBASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Gm17808-201ENSMUST00000200859 894 ntBASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc194A0A140LIT1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc194A0A140LIT1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Ccdc194A0A140LIT1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms