Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gm18733-201ENSMUST00000173950 856 ntBASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm18195-201ENSMUST00000207604 706 ntBASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm5867-201ENSMUST00000063197 592 ntBASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Trav13n-4A0A0G2JG01 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav13n-4A0A0G2JG01 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.71□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav13n-4A0A0G2JG01 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm12644-201ENSMUST00000119935 606 ntBASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav13n-4A0A0G2JG01 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trav13n-4A0A0G2JG01 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms