Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv30A0A0B4J1P1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm43347-201ENSMUST00000200226 580 ntBASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm7506-201ENSMUST00000207758 815 ntBASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv30A0A0B4J1P1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm7153-201ENSMUST00000117092 455 ntBASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm8655-201ENSMUST00000221159 852 ntBASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Birc2-201ENSMUST00000054878 378 ntBASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv30A0A0B4J1P1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv30A0A0B4J1P1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv30A0A0B4J1P1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Trbv30A0A0B4J1P1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv30A0A0B4J1P1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms