Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-4A0A075B654 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Gm12821-201ENSMUST00000120022 600 ntBASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav3-4A0A075B654 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm43017-201ENSMUST00000198296 752 ntBASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav3-4A0A075B654 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav3-4A0A075B654 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms