Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Gm43799-201ENSMUST00000201845 579 ntBASIC12.04□□□□□ -0.48
PdfS4R2K0 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.04□□□□□ -0.48
PdfS4R2K0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
PdfS4R2K0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
PdfS4R2K0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.03□□□□□ -0.48
PdfS4R2K0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
PdfS4R2K0 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.03□□□□□ -0.48
PdfS4R2K0 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.03□□□□□ -0.48
PdfS4R2K0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PdfS4R2K0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
PdfS4R2K0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.02□□□□□ -0.48
PdfS4R2K0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.02□□□□□ -0.48
PdfS4R2K0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
PdfS4R2K0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
PdfS4R2K0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Gm18958-201ENSMUST00000174258 762 ntBASIC12.02□□□□□ -0.49
PdfS4R2K0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PdfS4R2K0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.02□□□□□ -0.49
PdfS4R2K0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.02□□□□□ -0.49
PdfS4R2K0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.02□□□□□ -0.49
PdfS4R2K0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PdfS4R2K0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
PdfS4R2K0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdfS4R2K0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PdfS4R2K0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms