Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
H2afb2S4R1M3 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Gm17807-201ENSMUST00000186869 298 ntBASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
H2afb2S4R1M3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
H2afb2S4R1M3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Gm12895-201ENSMUST00000122214 226 ntBASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.66■□□□□ 0.1
H2afb2S4R1M3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
H2afb2S4R1M3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
H2afb2S4R1M3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
H2afb2S4R1M3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
H2afb2S4R1M3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms