Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
H2afb3S4R1G7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Gm6623-201ENSMUST00000173570 544 ntBASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
H2afb3S4R1G7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
H2afb3S4R1G7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Gm9987-201ENSMUST00000069768 567 ntBASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
H2afb3S4R1G7 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
H2afb3S4R1G7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms