Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lgr5Q9Z1P4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
Lgr5Q9Z1P4 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.64■□□□□ 0.58
Lgr5Q9Z1P4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lgr5Q9Z1P4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lgr5Q9Z1P4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lgr5Q9Z1P4 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lgr5Q9Z1P4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Mir449b-201ENSMUST00000104833 80 ntBASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Gm27321-201ENSMUST00000185021 205 ntBASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Gm2272-201ENSMUST00000194903 582 ntBASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.62■□□□□ 0.57
Lgr5Q9Z1P4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lgr5Q9Z1P4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.6■□□□□ 0.57
Lgr5Q9Z1P4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms