Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.76□□□□□ -0.05
Trim3Q9R1R2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim3Q9R1R2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim3Q9R1R2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gm12895-201ENSMUST00000122214 226 ntBASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim3Q9R1R2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Gm15372-201ENSMUST00000120729 834 ntBASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Rprl3-201ENSMUST00000157400 290 ntBASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim3Q9R1R2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms