Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shroom3Q9QXN0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Shroom3Q9QXN0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm15467-201ENSMUST00000120582 445 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm4535-201ENSMUST00000182274 558 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm10355-201ENSMUST00000097146 517 ntBASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shroom3Q9QXN0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shroom3Q9QXN0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms