Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Gm17807-201ENSMUST00000186869 298 ntBASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a2Q9JLR1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Gm9103-201ENSMUST00000119371 405 ntBASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.13□□□□□ -0.15
Sec61a2Q9JLR1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sec61a2Q9JLR1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sec61a2Q9JLR1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms