Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ybx3Q9JKB3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm42612-201ENSMUST00000197986 623 ntBASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm43170-201ENSMUST00000199827 612 ntBASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm15823-201ENSMUST00000064305 670 ntBASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ybx3Q9JKB3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 AC158529.1-201ENSMUST00000223618 239 ntBASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ybx3Q9JKB3 Gm5320-201ENSMUST00000207163 1519 ntBASIC20.27■□□□□ 0.83
Ybx3Q9JKB3 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.27■□□□□ 0.83
Ybx3Q9JKB3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Gm8131-201ENSMUST00000213783 1570 ntBASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Shd-206ENSMUST00000225145 998 ntBASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ybx3Q9JKB3 Ldb3-207ENSMUST00000227819 1499 ntBASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Gm24543-201ENSMUST00000103867 82 ntBASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ybx3Q9JKB3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx3Q9JKB3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx3Q9JKB3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx3Q9JKB3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ybx3Q9JKB3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms