Protein–RNA interactions for Protein: Q9JJW6

Alyref2, Aly/REF export factor 2, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alyref2Q9JJW6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Alyref2Q9JJW6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gm12085-201ENSMUST00000119263 940 ntBASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Gm18669-201ENSMUST00000216049 778 ntBASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alyref2Q9JJW6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alyref2Q9JJW6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Gm44487-201ENSMUST00000205145 325 ntBASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alyref2Q9JJW6 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alyref2Q9JJW6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms