Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.43□□□□□ -0.1
Dap3Q9ER88 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Dap3Q9ER88 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Gm7370-201ENSMUST00000219471 767 ntBASIC14.42□□□□□ -0.1
Dap3Q9ER88 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Dap3Q9ER88 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Gm37055-201ENSMUST00000191866 133 ntBASIC14.41□□□□□ -0.1
Dap3Q9ER88 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.41□□□□□ -0.1
Dap3Q9ER88 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Dap3Q9ER88 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Dap3Q9ER88 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Dap3Q9ER88 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms