Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Gm15427-201ENSMUST00000117288 531 ntBASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Gm16198-201ENSMUST00000118766 670 ntBASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cpsf1Q9EPU4 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Gm27528-202ENSMUST00000222916 2012 ntBASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Gm26308-201ENSMUST00000157768 69 ntBASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cpsf1Q9EPU4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cpsf1Q9EPU4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cpsf1Q9EPU4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Gm8396-201ENSMUST00000057361 823 ntBASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Cpsf1Q9EPU4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cpsf1Q9EPU4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cpsf1Q9EPU4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms