Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdc40Q9DC48 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Gm25745-201ENSMUST00000174945 133 ntBASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Gm2651-201ENSMUST00000203560 838 ntBASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.54□□□□□ -0.08
Cdc40Q9DC48 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdc40Q9DC48 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdc40Q9DC48 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdc40Q9DC48 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm18206-201ENSMUST00000207027 926 ntBASIC14.52□□□□□ -0.09
Cdc40Q9DC48 AW822252-206ENSMUST00000208904 237 ntBASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Gm6296-201ENSMUST00000222599 943 ntBASIC14.52□□□□□ -0.09
Cdc40Q9DC48 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdc40Q9DC48 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms