Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim42Q9D2H5 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.71■□□□□ 0.1
Trim42Q9D2H5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trim42Q9D2H5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Gm10698-201ENSMUST00000182663 604 ntBASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Gm18421-201ENSMUST00000204122 625 ntBASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim42Q9D2H5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim42Q9D2H5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim42Q9D2H5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms