Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Khdc3Q9CWU5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.05■□□□□ -0
Khdc3Q9CWU5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Khdc3Q9CWU5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 App-207ENSMUST00000227737 2827 ntBASIC15.04■□□□□ -0
Khdc3Q9CWU5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.04■□□□□ -0
Khdc3Q9CWU5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Gm44454-201ENSMUST00000198541 138 ntBASIC15.03■□□□□ -0
Khdc3Q9CWU5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Khdc3Q9CWU5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.02■□□□□ -0
Khdc3Q9CWU5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Khdc3Q9CWU5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc3Q9CWU5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Khdc3Q9CWU5 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Khdc3Q9CWU5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms