Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc43Q9CR29 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc43Q9CR29 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc43Q9CR29 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Ccdc43Q9CR29 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Gm14859-201ENSMUST00000117752 357 ntBASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Gm7284-201ENSMUST00000131667 944 ntBASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc43Q9CR29 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms