Protein–RNA interactions for Protein: Q9CQL2

Ccer1, Coiled-coil domain-containing glutamate-rich protein 1, mousemouse

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccer1Q9CQL2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccer1Q9CQL2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccer1Q9CQL2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccer1Q9CQL2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccer1Q9CQL2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccer1Q9CQL2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Gm9013-201ENSMUST00000132939 882 ntBASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ccer1Q9CQL2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Asic1-205ENSMUST00000228185 1818 ntBASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccer1Q9CQL2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ccer1Q9CQL2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ccer1Q9CQL2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Ccer1Q9CQL2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccer1Q9CQL2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ccer1Q9CQL2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Ccer1Q9CQL2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccer1Q9CQL2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccer1Q9CQL2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms