Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 AA414768-201ENSMUST00000121924 1257 ntBASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Gm23634-201ENSMUST00000175071 91 ntBASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2afb1Q9CQ70 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
H2afb1Q9CQ70 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb1Q9CQ70 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb1Q9CQ70 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb1Q9CQ70 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2afb1Q9CQ70 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Rprl3-201ENSMUST00000157400 290 ntBASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Gm25406-201ENSMUST00000157599 105 ntBASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Gm6659-201ENSMUST00000174752 547 ntBASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb1Q9CQ70 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb1Q9CQ70 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms