Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm8825-201ENSMUST00000182565 998 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm4518-201ENSMUST00000182638 718 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf8Q99PV0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gm27494-201ENSMUST00000184735 189 ntBASIC12.82□□□□□ -0.36
Prpf8Q99PV0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.82□□□□□ -0.36
Prpf8Q99PV0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.82□□□□□ -0.36
Prpf8Q99PV0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf8Q99PV0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf8Q99PV0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms