Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim16Q99PP9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim16Q99PP9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim16Q99PP9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim16Q99PP9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.33■□□□□ 0.04
Trim16Q99PP9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim16Q99PP9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.32■□□□□ 0.04
Trim16Q99PP9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.32■□□□□ 0.04
Trim16Q99PP9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim16Q99PP9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim16Q99PP9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms