Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm12859-201ENSMUST00000117834 427 ntBASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm11425-201ENSMUST00000119608 498 ntBASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Gm9396-201ENSMUST00000076703 567 ntBASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh23Q99PF4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Gm23984-201ENSMUST00000157139 203 ntBASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Gm17150-201ENSMUST00000165577 381 ntBASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Gm45668-201ENSMUST00000211271 493 ntBASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh23Q99PF4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Gm28631-201ENSMUST00000190740 334 ntBASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh23Q99PF4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh23Q99PF4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Gm6218-201ENSMUST00000219812 628 ntBASIC15.81■□□□□ 0.12
Cdh23Q99PF4 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Gm7775-201ENSMUST00000218871 853 ntBASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh23Q99PF4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cdh23Q99PF4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms