Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Gm6433-201ENSMUST00000118634 875 ntBASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkd1Q99MH6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkd1Q99MH6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nkd1Q99MH6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nkd1Q99MH6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms